SELECT 
  cscart_product_prices.product_id, 
  COALESCE(
    cscart_master_products_storefront_min_price.price, 
    MIN(
      IF(
        cscart_product_prices.percentage_discount = 0, 
        cscart_product_prices.price, 
        cscart_product_prices.price - (
          cscart_product_prices.price * cscart_product_prices.percentage_discount
        )/ 100
      )
    )
  ) AS price 
FROM 
  cscart_product_prices 
  LEFT JOIN cscart_master_products_storefront_min_price ON cscart_master_products_storefront_min_price.product_id = cscart_product_prices.product_id 
  AND cscart_master_products_storefront_min_price.storefront_id = 1 
WHERE 
  cscart_product_prices.product_id IN (
    276588, 276589, 276590, 276591, 276592, 
    276593, 276594, 276595, 276596, 276597, 
    276598, 276599, 276600, 276601, 276602, 
    276603, 276604, 276605, 276606, 276607, 
    276608, 276609, 276610, 276611, 276612, 
    276613, 276614, 276615, 276616, 276617
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00061

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "21.46"
    },
    "grouping_operation": {
      "using_filesort": false,
      "nested_loop": [
        {
          "table": {
            "table_name": "cscart_master_products_storefront_min_price",
            "access_type": "system",
            "possible_keys": [
              "PRIMARY"
            ],
            "rows_examined_per_scan": 0,
            "rows_produced_per_join": 1,
            "filtered": "0.00",
            "const_row_not_found": true,
            "cost_info": {
              "read_cost": "0.00",
              "eval_cost": "0.10",
              "prefix_cost": "0.00",
              "data_read_per_join": "16"
            },
            "used_columns": [
              "storefront_id",
              "product_id",
              "price"
            ]
          }
        },
        {
          "table": {
            "table_name": "cscart_product_prices",
            "access_type": "range",
            "possible_keys": [
              "usergroup",
              "product_id",
              "lower_limit",
              "usergroup_id"
            ],
            "key": "product_id",
            "used_key_parts": [
              "product_id"
            ],
            "key_length": "3",
            "rows_examined_per_scan": 31,
            "rows_produced_per_join": 6,
            "filtered": "20.00",
            "index_condition": "(`s2cart`.`cscart_product_prices`.`product_id` in (276588,276589,276590,276591,276592,276593,276594,276595,276596,276597,276598,276599,276600,276601,276602,276603,276604,276605,276606,276607,276608,276609,276610,276611,276612,276613,276614,276615,276616,276617))",
            "cost_info": {
              "read_cost": "20.84",
              "eval_cost": "0.62",
              "prefix_cost": "21.46",
              "data_read_per_join": "148"
            },
            "used_columns": [
              "product_id",
              "price",
              "percentage_discount",
              "lower_limit",
              "usergroup_id"
            ],
            "attached_condition": "((`s2cart`.`cscart_product_prices`.`lower_limit` = 1) and (`s2cart`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
          }
        }
      ]
    }
  }
}

Result

product_id price
276588 0.00000000
276589 0.00000000
276590 0.00000000
276591 0.00000000
276592 0.00000000
276593 0.00000000
276594 0.00000000
276595 0.00000000
276596 0.00000000
276597 0.00000000
276598 0.00000000
276599 0.00000000
276600 0.00000000
276601 0.00000000
276602 0.00000000
276603 0.00000000
276604 0.00000000
276605 0.00000000
276606 0.00000000
276607 0.00000000
276608 0.00000000
276609 0.00000000
276610 0.00000000
276611 0.00000000
276612 0.00000000
276613 0.00000000
276614 0.00000000
276615 0.00000000
276616 0.00000000
276617 0.00000000