SELECT 
  cscart_product_prices.product_id, 
  COALESCE(
    cscart_master_products_storefront_min_price.price, 
    MIN(
      IF(
        cscart_product_prices.percentage_discount = 0, 
        cscart_product_prices.price, 
        cscart_product_prices.price - (
          cscart_product_prices.price * cscart_product_prices.percentage_discount
        )/ 100
      )
    )
  ) AS price 
FROM 
  cscart_product_prices 
  LEFT JOIN cscart_master_products_storefront_min_price ON cscart_master_products_storefront_min_price.product_id = cscart_product_prices.product_id 
  AND cscart_master_products_storefront_min_price.storefront_id = 1 
WHERE 
  cscart_product_prices.product_id IN (
    276633, 276634, 276635, 276636, 276637, 
    276638, 276639, 276640, 276641, 276642, 
    276643, 276644, 276645, 276646, 276647, 
    276648, 276649, 276650, 276651, 276652, 
    276653, 276654, 276655, 276656, 276657, 
    276658, 276659, 276660, 276661, 276662
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00119

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "21.01"
    },
    "grouping_operation": {
      "using_filesort": false,
      "nested_loop": [
        {
          "table": {
            "table_name": "cscart_master_products_storefront_min_price",
            "access_type": "system",
            "possible_keys": [
              "PRIMARY"
            ],
            "rows_examined_per_scan": 0,
            "rows_produced_per_join": 1,
            "filtered": "0.00",
            "const_row_not_found": true,
            "cost_info": {
              "read_cost": "0.00",
              "eval_cost": "0.10",
              "prefix_cost": "0.00",
              "data_read_per_join": "16"
            },
            "used_columns": [
              "storefront_id",
              "product_id",
              "price"
            ]
          }
        },
        {
          "table": {
            "table_name": "cscart_product_prices",
            "access_type": "range",
            "possible_keys": [
              "usergroup",
              "product_id",
              "lower_limit",
              "usergroup_id"
            ],
            "key": "product_id",
            "used_key_parts": [
              "product_id"
            ],
            "key_length": "3",
            "rows_examined_per_scan": 30,
            "rows_produced_per_join": 5,
            "filtered": "20.00",
            "index_condition": "(`s2cart`.`cscart_product_prices`.`product_id` in (276633,276634,276635,276636,276637,276638,276639,276640,276641,276642,276643,276644,276645,276646,276647,276648,276649,276650,276651,276652,276653,276654,276655,276656,276657,276658,276659,276660,276661,276662))",
            "cost_info": {
              "read_cost": "20.41",
              "eval_cost": "0.60",
              "prefix_cost": "21.01",
              "data_read_per_join": "143"
            },
            "used_columns": [
              "product_id",
              "price",
              "percentage_discount",
              "lower_limit",
              "usergroup_id"
            ],
            "attached_condition": "((`s2cart`.`cscart_product_prices`.`lower_limit` = 1) and (`s2cart`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
          }
        }
      ]
    }
  }
}

Result

product_id price
276633 0.00000000
276634 0.00000000
276635 0.00000000
276636 0.00000000
276637 0.00000000
276638 0.00000000
276639 0.00000000
276640 0.00000000
276641 0.00000000
276642 0.00000000
276643 0.00000000
276644 0.00000000
276645 0.00000000
276646 0.00000000
276647 0.00000000
276648 0.00000000
276649 0.00000000
276650 0.00000000
276651 0.00000000
276652 0.00000000
276653 0.00000000
276654 0.00000000
276655 0.00000000
276656 0.00000000
276657 0.00000000
276658 0.00000000
276659 0.00000000
276660 0.00000000
276661 0.00000000
276662 0.00000000